Stem-loop ccr-mir-101a

Accession

MI0023304

Description

Cyprinus carpio ccr-mir-101a precursor miRNA

Literature search

2 open access papers mention ccr-mir-101a
(7 sentences)

Sequence

1956061 reads, 7550.0 reads per million, 33 experiments

ggcugcccugguUCAGUUAUCACAGUGCUGAUGCUGuccaucuuaaaggUACAGUACUGUGAUAACUGAAGgauggcugcc
(((.(((....(((((((((((((((((((.((((............)))))))))))))))))))))))....))).)))

Structure

   u   cugg                   A    Gucca 
ggc gcc    uUCAGUUAUCACAGUGCUG UGCU     u
||| |||    ||||||||||||||||||| ||||      
ccg cgg    AAGUCAAUAGUGUCAUGAC AUgg     c
   u   uagG                   -    aaauu 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-101a-5p

• Accession: MIMAT0058256
• Description: Cyprinus carpio ccr-miR-101a-5p mature miRNA
• Sequence: 13 - UCAGUUAUCACAGUGCUGAUGCUG - 36
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-101a-3p

• Accession: MIMAT0026196
• Description: Cyprinus carpio ccr-miR-101a-3p mature miRNA
• Sequence: 50 - UACAGUACUGUGAUAACUGAAG - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925