Stem-loop ccr-mir-101b

Accession

MI0023305

Description

Cyprinus carpio ccr-mir-101b precursor miRNA

Literature search

1 open access papers mention ccr-mir-101b
(2 sentences)

Sequence

2930155 reads, 10844.0 reads per million, 33 experiments

uuguccauuuuCAGUUAUCAUGGUACCGGUGCUGUgugccugucaaGUACAGUACUAUGAUAACUGAagauugac
..(((.((((((((((((((((((((..(((((............))))).)))))))))))))))))))).)))

Structure

uu   c                    CG     GUgug 
  guc auuuuCAGUUAUCAUGGUAC  GUGCU     c
  ||| ||||||||||||||||||||  |||||      
  cag uagaAGUCAAUAGUAUCAUG  CAUGa     c
--   u                    -A     acugu 

Annotation confidence Medium

Genome context

Unknown

Mature ccr-miR-101b-5p

• Accession: MIMAT0058257
• Description: Cyprinus carpio ccr-miR-101b-5p mature miRNA
• Sequence: 12 - CAGUUAUCAUGGUACCGGUGCUGU - 35
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-101b-3p

• Accession: MIMAT0026197
• Description: Cyprinus carpio ccr-miR-101b-3p mature miRNA
• Sequence: 47 - GUACAGUACUAUGAUAACUGA - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925