Stem-loop ccr-mir-103

Accession

MI0023306

Description

Cyprinus carpio ccr-mir-103 precursor miRNA

Sequence

288768 reads, 1254.0 reads per million, 33 experiments

uacucugagcuuugAGCCUCUUUACAAUGCUGCCUUGUagacccagaaucaAGCAGCAUUGUACAGGGCUAUGAaagcacagag
..(((((.(((((.((((.((.(((((((((((.(((............)))))))))))))).))))))...))))).)))))

Structure

ua     a     --g    U  U           C   Uagac 
  cucug gcuuu   AGCC CU UACAAUGCUGC UUG     c
  ||||| |||||   |||| || ||||||||||| |||      
  gagac cgaaA   UCGG GA AUGUUACGACG Aac     c
--     a     GUA    -  C           -   uaaga 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-103-5p

• Accession: MIMAT0058258
• Description: Cyprinus carpio ccr-miR-103-5p mature miRNA
• Sequence: 15 - AGCCUCUUUACAAUGCUGCCUUGU - 38
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-103-3p

• Accession: MIMAT0026198
• Description: Cyprinus carpio ccr-miR-103-3p mature miRNA
• Sequence: 52 - AGCAGCAUUGUACAGGGCUAUGA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925