Stem-loop ccr-mir-10c

Accession

MI0023309

Description

Cyprinus carpio ccr-mir-10c precursor miRNA

Literature search

2 open access papers mention ccr-mir-10c
(5 sentences)

Sequence

1427644 reads, 6642.0 reads per million, 33 experiments

auauaUACCCUGUAGAUCCGGAUUUGUGuaaacagacgcacagucaCAAAUUCGUAUCUAGGGGAGUaugua
.((((((((((.(((((.((((((((((................)))))))))).))))).))).)))))))

Structure

a       -   G     C          uaaacag 
 uauaUAC CCU UAGAU CGGAUUUGUG       a
 ||||||| ||| ||||| ||||||||||        
 auguaUG GGG AUCUA GCUUAAACac       c
-       A   G     U          ugacacg 

Annotation confidence Medium

Genome context

Unknown

Mature ccr-miR-10c-5p

• Accession: MIMAT0026201
• Description: Cyprinus carpio ccr-miR-10c-5p mature miRNA
• Sequence: 6 - UACCCUGUAGAUCCGGAUUUGUG - 28
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-10c-3p

• Accession: MIMAT0058261
• Description: Cyprinus carpio ccr-miR-10c-3p mature miRNA
• Sequence: 47 - CAAAUUCGUAUCUAGGGGAGU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925