Stem-loop ccr-mir-125b

Accession

MI0023312

Description

Cyprinus carpio ccr-mir-125b precursor miRNA

Literature search

2 open access papers mention ccr-mir-125b
(4 sentences)

Sequence

1625839 reads, 8022.0 reads per million, 33 experiments

ggUCCCUGAGACCCUAACUUGUGAgcuuugugugcugaaaaucACAGGUUAAGCUCUUGGGACC
((((((.((((.(.((((((((((..(((........))).)))))))))).).))))))))))

Structure

      U    C C          gc   gug 
ggUCCC GAGA C UAACUUGUGA  uuu   u
|||||| |||| | ||||||||||  |||    
CCAGGG UUCU G AUUGGACAcu  aaa   g
      -    C A          -a   guc 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-125b-5p

• Accession: MIMAT0026204
• Description: Cyprinus carpio ccr-miR-125b-5p mature miRNA
• Sequence: 3 - UCCCUGAGACCCUAACUUGUGA - 24
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-125b-3p

• Accession: MIMAT0058263
• Description: Cyprinus carpio ccr-miR-125b-3p mature miRNA
• Sequence: 44 - ACAGGUUAAGCUCUUGGGACC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925