Stem-loop ccr-mir-132a

Accession

MI0023320

Description

Cyprinus carpio ccr-mir-132a precursor miRNA

Literature search

1 open access papers mention ccr-mir-132a
(2 sentences)

Sequence

3848 reads, 22.0 reads per million, 33 experiments

cuugcugucuccauggugACCGUGGCAUUAGAUUGUUACUguagcaacagcacuucuggUAACAGUCUACAGCCAUGGUCGcuagggggcag
....((((((((.(((((((((((((..((((((((((((((.((....))))....))))))))))))..)))))))))))))))))))))

Structure

cuug        a             AU            ----  a  a 
    cugucucc uggugACCGUGGC  UAGAUUGUUACU    gu gc a
    |||||||| |||||||||||||  ||||||||||||    || ||  
    gacggggg aucGCUGGUACCG  AUCUGACAAUgg    ca cg c
----        -             AC            ucuu  -  a 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-132a-5p

• Accession: MIMAT0058270
• Description: Cyprinus carpio ccr-miR-132a-5p mature miRNA
• Sequence: 19 - ACCGUGGCAUUAGAUUGUUACU - 40
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-132a-3p

• Accession: MIMAT0026213
• Description: Cyprinus carpio ccr-miR-132a-3p mature miRNA
• Sequence: 60 - UAACAGUCUACAGCCAUGGUCG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925