Stem-loop ccr-mir-142-2

Accession

MI0023328

Description

Cyprinus carpio ccr-mir-142-2 precursor miRNA

Literature search

1 open access papers mention ccr-mir-142-2
(1 sentences)

Sequence

667439 reads, 2508.0 reads per million, 32 experiments

gaagagaagaggcgggaacaucagugcagucacuCAUAAAGUAGACAGCACUACUaaaggucucuacacaguGUAGUGUUUCCUACUUUAUGGAUGa
...........(((..........)))..(((.(((((((((((..((((((((.....((....)).....))))))))..))))))))))).)))

Structure

gaagagaagaggcgggaacaucagugcag   c           AC        Uaaag  c 
                             uca uCAUAAAGUAG  AGCACUAC     gu u
                             ||| |||||||||||  ||||||||     ||  
                             aGU GGUAUUUCAUC  UUGUGAUG     ca c
-----------------------------   A           CU        ugaca  u 

Annotation confidence Medium

Genome context

Unknown

Mature ccr-miR-142-5p

• Accession: MIMAT0026222
• Description: Cyprinus carpio ccr-miR-142-5p mature miRNA
• Sequence: 35 - CAUAAAGUAGACAGCACUACU - 55
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-142-3p

• Accession: MIMAT0026223
• Description: Cyprinus carpio ccr-miR-142-3p mature miRNA
• Sequence: 73 - GUAGUGUUUCCUACUUUAUGGAUG - 96
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925