Stem-loop ccr-mir-148

Accession

MI0023332

Description

Cyprinus carpio ccr-mir-148 precursor miRNA

Literature search

2 open access papers mention ccr-mir-148
(3 sentences)

Sequence

3193284 reads, 11832.0 reads per million, 33 experiments

aguaAAGUUCUGUGAUACACUCCGACUcuaauugcuugcagUCAGUGCAUUACAGAACUUUGUu
..((((((((((((((.((((..((((.(((....))).)))))))).))))))))))))))..

Structure

ag              A    CC    c   u 
  uaAAGUUCUGUGAU CACU  GACU uaa u
  |||||||||||||| ||||  |||| |||  
  GUUUCAAGACAUUA GUGA  CUga guu g
uU              C    --    c   c 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-148-5p

• Accession: MIMAT0058277
• Description: Cyprinus carpio ccr-miR-148-5p mature miRNA
• Sequence: 5 - AAGUUCUGUGAUACACUCCGACU - 27
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-148-3p

• Accession: MIMAT0026227
• Description: Cyprinus carpio ccr-miR-148-3p mature miRNA
• Sequence: 42 - UCAGUGCAUUACAGAACUUUGU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925