Stem-loop ccr-mir-153b

Accession

MI0023334

Description

Cyprinus carpio ccr-mir-153b precursor miRNA

Literature search

1 open access papers mention ccr-mir-153b
(1 sentences)

Sequence

68246 reads, 366.0 reads per million, 33 experiments

aguauugcacagcugucuguGUCAUUUUUGUGGUUUGCAGCUaguagucugguuccagUUGCAUAGUCACAAAAAUGAGCacagacaggugug
.......((((.((((((((((((((((((((((((((((((.(..........).))))))).)))))))))))))).))))))))).))))

Structure

aguauug    g         -              -       a uagu 
       caca cugucuguG UCAUUUUUGUGGUU UGCAGCU g    c
       |||| ||||||||| |||||||||||||| ||||||| |     
       gugu gacagacaC AGUAAAAACACUGA ACGUUga c    u
-------    g         G              U       c uugg 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-153b-5p

• Accession: MIMAT0058279
• Description: Cyprinus carpio ccr-miR-153b-5p mature miRNA
• Sequence: 21 - GUCAUUUUUGUGGUUUGCAGCU - 42
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-153b-3p

• Accession: MIMAT0026229
• Description: Cyprinus carpio ccr-miR-153b-3p mature miRNA
• Sequence: 59 - UUGCAUAGUCACAAAAAUGAGC - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925