Stem-loop ccr-mir-153c

Accession

MI0023335

Description

Cyprinus carpio ccr-mir-153c precursor miRNA

Sequence

132852 reads, 613.0 reads per million, 33 experiments

cguagcacaccucccaguGUCAUUUUUGUGAUUUGCAGCUaguagucuggguccagUUGCAUAGUCACAAAAAUGAUCauugguagaugugagugca
.(((.((((.((.(((((((((((((((((((((((((((.(..........).))))))).)))))))))))))).)))))).)).))))..))).

Structure

c   -g    c  c      -              -       a uagu 
 gua  caca cu ccaguG UCAUUUUUGUGAUU UGCAGCU g    c
 |||  |||| || |||||| |||||||||||||| ||||||| |     
 cgu  gugu ga gguuaC AGUAAAAACACUGA ACGUUga c    u
a   ga    a  u      U              U       c uggg 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-153c-5p

• Accession: MIMAT0058280
• Description: Cyprinus carpio ccr-miR-153c-5p mature miRNA
• Sequence: 19 - GUCAUUUUUGUGAUUUGCAGCU - 40
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-153c-3p

• Accession: MIMAT0026230
• Description: Cyprinus carpio ccr-miR-153c-3p mature miRNA
• Sequence: 57 - UUGCAUAGUCACAAAAAUGAUC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925