Stem-loop ccr-mir-155

Accession

MI0023336

Description

Cyprinus carpio ccr-mir-155 precursor miRNA

Sequence

12380 reads, 91.0 reads per million, 33 experiments

ucagguUUAAUGCUAAUCGUGAUAGGGGuuuuguacuacugaaCACCUAUGCUGUUAGCAUUAguccugcg
.((((.(((((((((((.((.(((((.((((.((...)).)))).))))))).))))))))))).))))..

Structure

-u    u           C  G     G    u  a 
  cagg UUAAUGCUAAU GU AUAGG Guuu gu  
  |||| ||||||||||| || ||||| |||| || c
  gucc gAUUACGAUUG CG UAUCC Caag ca  
gc    u           U  -     A    u  u 

Annotation confidence Medium

Genome context

Unknown

Mature ccr-miR-155-5p

• Accession: MIMAT0026231
• Description: Cyprinus carpio ccr-miR-155-5p mature miRNA
• Sequence: 7 - UUAAUGCUAAUCGUGAUAGGGG - 28
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-155-3p

• Accession: MIMAT0058281
• Description: Cyprinus carpio ccr-miR-155-3p mature miRNA
• Sequence: 44 - CACCUAUGCUGUUAGCAUUA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925