Stem-loop ccr-mir-15b

Accession

MI0023338

Description

Cyprinus carpio ccr-mir-15b precursor miRNA

Literature search

2 open access papers mention ccr-mir-15b
(2 sentences)

Sequence

167387 reads, 648.0 reads per million, 33 experiments

cccagagugcccugUAGCAGCACAUCAUGGUUUGUAaguucuaagggcaaauucCAAAUUAUGAUGUGCUGUCACUgggagccugggaguuu
(((((.((.(((.((.((((((((((((((((((.((((((...))))...)).)))))))))))))))))).)).))).))))))).....

Structure

-----     a  g   u  A                  U  ---    u 
     cccag gu ccc gU GCAGCACAUCAUGGUUUG Aa   guuc  
     ||||| || ||| || |||||||||||||||||| ||   |||| a
     ggguc cg ggg CA UGUCGUGUAGUAUUAAAC uu   cggg  
uuuga     -  a   U  C                  c  aaa    a 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-15b-5p

• Accession: MIMAT0026232
• Description: Cyprinus carpio ccr-miR-15b-5p mature miRNA
• Sequence: 15 - UAGCAGCACAUCAUGGUUUGUA - 36
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-15b-3p

• Accession: MIMAT0058282
• Description: Cyprinus carpio ccr-miR-15b-3p mature miRNA
• Sequence: 55 - CAAAUUAUGAUGUGCUGUCACU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925