miRBase entry: ccr-mir-16b

Stem-loop ccr-mir-16b


Accession
MI0023340
Description
Cyprinus carpio ccr-mir-16b precursor miRNA


Sequence

ucuugcuuUAGCAGCACGUAAAUAUUGGAGuuacuccuuggccaaugccuccaauauugcucgugcugcugaagcaaga
((((((((((((((((((..(((((((((..........(((....))))))))))))...))))))))))))))))))

Structure
                  -UA         Guuacuccuu   c 
ucuugcuuUAGCAGCACG   AAUAUUGGA          ggc a
||||||||||||||||||   |||||||||          |||  
agaacgaagucgucgugc   uuauaaccu          ccg a
                  ucg         ----------   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-16b

Accession MIMAT0026234
Description Cyprinus carpio ccr-miR-16b mature miRNA
Sequence 9 - UAGCAGCACGUAAAUAUUGGAG - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925