Stem-loop ccr-mir-181b

Accession

MI0023344

Description

Cyprinus carpio ccr-mir-181b precursor miRNA

Literature search

2 open access papers mention ccr-mir-181b
(7 sentences)

Sequence

726056 reads, 3601.0 reads per million, 33 experiments

aaugacugcaauaAACAUUCAUUGCUGUCGGUGGguuuuaaauugacacaaCUCACUGAUCAAUGAAUGCAAAcugcggugca
....((((((.....(((((((((..(((((((((((............)))))))))))))))))))).....))))))...

Structure

aaug      auaAA         CU           uuaaa 
    acugca     CAUUCAUUG  GUCGGUGGguu     u
    ||||||     |||||||||  |||||||||||      
    uggcgu     GUAAGUAAC  UAGUCACUCaa     u
-acg      cAAAC         --           cacag 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-181b-5p

• Accession: MIMAT0026239
• Description: Cyprinus carpio ccr-miR-181b-5p mature miRNA
• Sequence: 14 - AACAUUCAUUGCUGUCGGUGG - 34
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-181b-3p

• Accession: MIMAT0058287
• Description: Cyprinus carpio ccr-miR-181b-3p mature miRNA
• Sequence: 52 - CUCACUGAUCAAUGAAUGCAAA - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925