Stem-loop ccr-mir-183

Accession

MI0023347

Description

Cyprinus carpio ccr-mir-183 precursor miRNA

Sequence

986875 reads, 5856.0 reads per million, 33 experiments

uguucugugUAUGGCACUGGUAGAAUUCACUGugaaagcacacuaucagUGAAUUACCAAAGGGCCAUAAAcagagcaga
((((((((.((((((..(((((..((((((((..(........)..)))))))))))))....)))))).))))))))..

Structure

--        g      --AC     GA        ug aag 
  uguucugu UAUGGC    UGGUA  AUUCACUG  a   c
  |||||||| ||||||    |||||  ||||||||  |    
  acgagacA AUACCG    ACCAU  UAAGUgac  u   a
ag        A      GGAA     --        ua cac 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-183-5p

• Accession: MIMAT0026243
• Description: Cyprinus carpio ccr-miR-183-5p mature miRNA
• Sequence: 10 - UAUGGCACUGGUAGAAUUCACUG - 32
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-183-3p

• Accession: MIMAT0058289
• Description: Cyprinus carpio ccr-miR-183-3p mature miRNA
• Sequence: 50 - UGAAUUACCAAAGGGCCAUAAA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925