Stem-loop ccr-mir-187

Accession

MI0023349

Description

Cyprinus carpio ccr-mir-187 precursor miRNA

Sequence

6901 reads, 44.0 reads per million, 29 experiments

accuguggcugggccaggGGCUGCAACACAGGACAUGGgagcugccucucacucccgcUCGUGUCUUGUGUUGCAGCCAGUggaacugcugcacugu
...((((((.(..(((..(((((((((((((((((((((((.((.....)))))))....))))))))))))))))))..)))..).))))))....

Structure

-acc      u gg   gg                  ----     c  c 
    uguggc g  cca  GGCUGCAACACAGGACAU    GGgag ug c
    |||||| |  |||  ||||||||||||||||||    ||||| || u
    acgucg c  ggU  CCGACGUUGUGUUCUGUG    cccuc ac c
uguc      u aa   GA                  CUcg     -  u 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-187-5p

• Accession: MIMAT0058291
• Description: Cyprinus carpio ccr-miR-187-5p mature miRNA
• Sequence: 19 - GGCUGCAACACAGGACAUGG - 38
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-187-3p

• Accession: MIMAT0026245
• Description: Cyprinus carpio ccr-miR-187-3p mature miRNA
• Sequence: 59 - UCGUGUCUUGUGUUGCAGCCAGU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925