Stem-loop ccr-mir-193a

Accession

MI0023355

Description

Cyprinus carpio ccr-mir-193a precursor miRNA

Literature search

1 open access papers mention ccr-mir-193a
(1 sentences)

Sequence

32963 reads, 139.0 reads per million, 30 experiments

aaagacauuaauguguuagagguUGGGUCUUUGCGGGCAAGGUGAguaguuaaauuuacucucAACUGGCCUACAAAGUCCCAGUuucuggcucauguaaucauccuc
..........(((.(((((((((((((.(((((.((((.((.((((.(((.......))))))).)).)))).))))).))))))))))))).)))............

Structure

--aaagacauua   u             U     C    A  G    u   ua 
            aug guuagagguUGGG CUUUG GGGC AG UGAg agu  a
            ||| ||||||||||||| ||||| |||| || |||| |||  a
            uac cggucuuUGACCC GAAAC UCCG UC Acuc uca  u
cuccuacuaaug   u             U     A    G  A    -   uu 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-193a-5p

• Accession: MIMAT0058297
• Description: Cyprinus carpio ccr-miR-193a-5p mature miRNA
• Sequence: 24 - UGGGUCUUUGCGGGCAAGGUGA - 45
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-193a-3p

• Accession: MIMAT0026251
• Description: Cyprinus carpio ccr-miR-193a-3p mature miRNA
• Sequence: 64 - AACUGGCCUACAAAGUCCCAGU - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925