Stem-loop ccr-mir-19d

Accession

MI0023360

Description

Cyprinus carpio ccr-mir-19d precursor miRNA

Literature search

1 open access papers mention ccr-mir-19d
(1 sentences)

Sequence

55914 reads, 263.0 reads per million, 33 experiments

uugucgggugacggucAGCUUUGCGGGGUGGGCAUUCAGCcucgggucacaccgcUGUGCAAACCCAUGCAAAACUGAcugcacacgacacgc
.(((((.(((.(((((((.((((((((((..(((..((((...((......)))))))))..)))).)))))).)))))))))).)))))...

Structure

--u     g   a       C      -    GG   UU    cuc  gu 
   ugucg gug cggucAG UUUGCG GGGU  GCA  CAGC   gg  c
   ||||| ||| ||||||| |||||| ||||  |||  ||||   ||   
   acagc cac gucAGUC AAACGU CCCA  CGU  GUcg   cc  a
cgc     a   -       A      A    AA   --    ---  ac 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-19d-5p

• Accession: MIMAT0058301
• Description: Cyprinus carpio ccr-miR-19d-5p mature miRNA
• Sequence: 17 - AGCUUUGCGGGGUGGGCAUUCAGC - 40
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-19d-3p

• Accession: MIMAT0026257
• Description: Cyprinus carpio ccr-miR-19d-3p mature miRNA
• Sequence: 56 - UGUGCAAACCCAUGCAAAACUGA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925