Stem-loop ccr-mir-203a

Accession

MI0023363

Description

Cyprinus carpio ccr-mir-203a precursor miRNA

Literature search

1 open access papers mention ccr-mir-203a
(1 sentences)

Sequence

77015 reads, 906.0 reads per million, 33 experiments

ucuucuggucucucuggugcAGUGGUUCUUAACAGUUCAACAguucuaucucaaaauuGUGAAAUGUUUAGGACCACUUGaucagggagauacuagaa
...(((((((((((((((..(((((((((.((((.((((.(((((.........))))))))).)))).)))))))))..))))))))))..))))).

Structure

ucu     --          gc         U    G    A     cua 
   ucugg  ucucucuggu  AGUGGUUCU AACA UUCA CAguu   u
   |||||  ||||||||||  ||||||||| |||| |||| |||||   c
   agauc  agagggacua  UCACCAGGA UUGU AAGU Guuaa   u
--a     au          GU         U    A    -     aac 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-203a-5p

• Accession: MIMAT0058304
• Description: Cyprinus carpio ccr-miR-203a-5p mature miRNA
• Sequence: 21 - AGUGGUUCUUAACAGUUCAACA - 42
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-203a-3p

• Accession: MIMAT0026260
• Description: Cyprinus carpio ccr-miR-203a-3p mature miRNA
• Sequence: 59 - GUGAAAUGUUUAGGACCACUUG - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925