Stem-loop ccr-mir-205

Accession

MI0023365

Description

Cyprinus carpio ccr-mir-205 precursor miRNA

Sequence

292226 reads, 2206.0 reads per million, 33 experiments

cugugaauucuaUCCUUCAUUCCACCGGAGUCUGuguagcuguccaaucaGAUUUCAGUGGUGUGAAGUGUAggagacaugg
(((((..((((((.((((((.((((.((((((((..............)))))))).)))).)))))).))))))..)))))

Structure

     aa      C      U    C        uguagc 
cugug  uucuaU CUUCAU CCAC GGAGUCUG      u
|||||  |||||| |||||| |||| ||||||||       
gguac  aggAUG GAAGUG GGUG CUUUAGac      g
     ag      U      U    A        uaaccu 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-205-5p

• Accession: MIMAT0026263
• Description: Cyprinus carpio ccr-miR-205-5p mature miRNA
• Sequence: 13 - UCCUUCAUUCCACCGGAGUCUG - 34
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-205-3p

• Accession: MIMAT0058305
• Description: Cyprinus carpio ccr-miR-205-3p mature miRNA
• Sequence: 51 - GAUUUCAGUGGUGUGAAGUGUA - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925