Stem-loop ccr-mir-210

Accession

MI0023369

Description

Cyprinus carpio ccr-mir-210 precursor miRNA

Literature search

1 open access papers mention ccr-mir-210
(1 sentences)

Sequence

244056 reads, 980.0 reads per million, 33 experiments

gugauuucugaaagcagguaAGCCACUGACUAACGCACAUUGcgccuguucuucacuccaCUGUGCGUGUGACAGCGGCUaaccagcuuuuggau
......(((((((((.(((.((((.(((.(..(((((((.((.(..((.....))..))).)))))))..).))).)))).))).))))))))).

Structure

gugauu         a   a    A   A UA       U  c cc  u 
      ucugaaagc ggu AGCC CUG C  ACGCACA UG g  ug u
      ||||||||| ||| |||| ||| |  ||||||| || |  || c
      agguuuucg cca UCGG GAC G  UGCGUGU ac c  ac u
-----u         a   a    C   A UG       C  - uc  u 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-210-5p

• Accession: MIMAT0058308
• Description: Cyprinus carpio ccr-miR-210-5p mature miRNA
• Sequence: 21 - AGCCACUGACUAACGCACAUUG - 42
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-210-3p

• Accession: MIMAT0026268
• Description: Cyprinus carpio ccr-miR-210-3p mature miRNA
• Sequence: 61 - CUGUGCGUGUGACAGCGGCU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925