Stem-loop ccr-mir-214

Accession

MI0023370

Description

Cyprinus carpio ccr-mir-214 precursor miRNA

Literature search

2 open access papers mention ccr-mir-214
(10 sentences)

Sequence

83061 reads, 422.0 reads per million, 32 experiments

cugucUGCCUGUCUACACUUGCUGUGCagaacuuccugcaccugUACAGCAGGCACAGACAGGCAGacag
((((((((((((((...((((((((((((............))))))))))))...))))))))))))))

Structure

              ACA            aacuu 
cugucUGCCUGUCU   CUUGCUGUGCag     c
||||||||||||||   ||||||||||||      
gacaGACGGACAGA   GGACGACAUguc     c
              CAC            cacgu 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-214-5p

• Accession: MIMAT0058309
• Description: Cyprinus carpio ccr-miR-214-5p mature miRNA
• Sequence: 6 - UGCCUGUCUACACUUGCUGUGC - 27
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-214-3p

• Accession: MIMAT0026269
• Description: Cyprinus carpio ccr-miR-214-3p mature miRNA
• Sequence: 45 - UACAGCAGGCACAGACAGGCAG - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925