Stem-loop ccr-mir-217

Accession

MI0023371

Description

Cyprinus carpio ccr-mir-217 precursor miRNA

Literature search

1 open access papers mention ccr-mir-217
(1 sentences)

Sequence

1144916 reads, 4386.0 reads per million, 33 experiments

guuugaucuugcugauguuggugaUACUGCAUCAGGAACUGAUUGGAugauaucuaggagcCAUCAGUUCUUGAUGCACUCCCUucagcaucgaaaga
......((((..(((((((((......((((((((((((((((.((..............))))))))))))))))))......))))))))).))))

Structure

guuuga    gc         ugaUAC                U  Augaua 
      ucuu  ugauguugg      UGCAUCAGGAACUGAU GG      u
      ||||  |||||||||      |||||||||||||||| ||       
      agaa  gcuacgacu      ACGUAGUUCUUGACUA Cc      c
------    -a         UCCCUC                -  gaggau 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-217-5p

• Accession: MIMAT0026270
• Description: Cyprinus carpio ccr-miR-217-5p mature miRNA
• Sequence: 25 - UACUGCAUCAGGAACUGAUUGGA - 47
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-217-3p

• Accession: MIMAT0058310
• Description: Cyprinus carpio ccr-miR-217-3p mature miRNA
• Sequence: 62 - CAUCAGUUCUUGAUGCACUCCCU - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925