Stem-loop ccr-mir-218b

Accession

MI0023373

Description

Cyprinus carpio ccr-mir-218b precursor miRNA

Sequence

13661 reads, 79.0 reads per million, 33 experiments

gacaccaUUGUGCUUGAUCUAACCAUGCaguucccuuucugucCAUGGUUGUGCCAAGCACUUU
.........(((((((...(((((((((((........)))..))))))))...)))))))...

Structure

gacaccaUU       AUC        --   uuc 
         GUGCUUG   UAACCAUG  Cag   c
         |||||||   ||||||||  |||    
         CACGAAC   GUUGGUAC  guc   c
------UUU       CGU        cu   uuu 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-218b-5p

• Accession: MIMAT0026272
• Description: Cyprinus carpio ccr-miR-218b-5p mature miRNA
• Sequence: 8 - UUGUGCUUGAUCUAACCAUGC - 28
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-218b-3p

• Accession: MIMAT0058312
• Description: Cyprinus carpio ccr-miR-218b-3p mature miRNA
• Sequence: 44 - CAUGGUUGUGCCAAGCACUUU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925