Stem-loop ccr-mir-22b

Accession

MI0023377

Description

Cyprinus carpio ccr-mir-22b precursor miRNA

Literature search

1 open access papers mention ccr-mir-22b
(1 sentences)

Sequence

121845 reads, 500.0 reads per million, 33 experiments

cguugcuucacaguCGUUCUUCACUGGCUAGUUUUauguggcuccaccuuaAAGCUGCCAGUUGAAGAGCUGUuguggguaac
.((((((.(((((..(((((((((((((.(((((((.(((....)))..)))))))))))).))))))))..)))))))))))

Structure

c      u     uC        -     U       -u   g 
 guugcu cacag  GUUCUUCA CUGGC AGUUUUa  gug c
 |||||| |||||  |||||||| ||||| |||||||  |||  
 caaugg guguU  CGAGAAGU GACCG UCGAAau  cac u
-      -     GU        U     -       uc   c 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-22b-5p

• Accession: MIMAT0058316
• Description: Cyprinus carpio ccr-miR-22b-5p mature miRNA
• Sequence: 15 - CGUUCUUCACUGGCUAGUUUU - 35
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-22b-3p

• Accession: MIMAT0026276
• Description: Cyprinus carpio ccr-miR-22b-3p mature miRNA
• Sequence: 52 - AAGCUGCCAGUUGAAGAGCUGU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925