Stem-loop ccr-mir-26a

Accession

MI0023382

Description

Cyprinus carpio ccr-mir-26a precursor miRNA

Literature search

3 open access papers mention ccr-mir-26a
(13 sentences)

Sequence

17335740 reads, 68925.0 reads per million, 33 experiments

aguggcuguucccuugUUCAAGUAAUCCAGGAUAGGCUgucuguccugggaggCCUAUUCAUGAUUACUUGCACUagguggcagccguuu
...(((((((.(((.((.(((((((((..(((((((((.(((......))))))))))))..))))))))).)).))).)))))))....

Structure

-agu       c   u  U         CA         g   gu 
    ggcuguu ccu gU CAAGUAAUC  GGAUAGGCU ucu  c
    ||||||| ||| || |||||||||  ||||||||| |||   
    ccgacgg gga CA GUUCAUUAG  CUUAUCCgg agg  c
uuug       u   U  C         UA         -   gu 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-26a-5p

• Accession: MIMAT0026281
• Description: Cyprinus carpio ccr-miR-26a-5p mature miRNA
• Sequence: 17 - UUCAAGUAAUCCAGGAUAGGCU - 38
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-26a-3p

• Accession: MIMAT0058321
• Description: Cyprinus carpio ccr-miR-26a-3p mature miRNA
• Sequence: 54 - CCUAUUCAUGAUUACUUGCACU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925