Stem-loop ccr-mir-27d

Accession

MI0023385

Description

Cyprinus carpio ccr-mir-27d precursor miRNA

Literature search

3 open access papers mention ccr-mir-27d
(17 sentences)

Sequence

ucuaagcgggugcagagcuuagcugauuggugaacaugcacgcuuuguuuuuugUUCACAGUGGCUAAGUUCUUCaccugaaaagaaa
(((...((((((.(((((((((((.((((.((((((...((.....))....))))))))))))))))))))).))))))...)))..

Structure

--   aag      c           g    g      -ugc  g 
  ucu   cgggug agagcuuagcu auug ugaaca    ac c
  |||   |||||| ||||||||||| |||| ||||||    || u
  aga   guccaC UCUUGAAUCGG UGAC ACUUgu    ug u
aa   aaa      U           -    -      uuuu  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ccr-miR-27d

• Accession: MIMAT0026285
• Description: Cyprinus carpio ccr-miR-27d mature miRNA
• Sequence: 55 - UUCACAGUGGCUAAGUUCUUC - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925