Stem-loop ccr-mir-365

Accession

MI0023394

Description

Cyprinus carpio ccr-mir-365 precursor miRNA

Literature search

1 open access papers mention ccr-mir-365
(8 sentences)

Sequence

21934 reads, 158.0 reads per million, 33 experiments

agcaagaaaaaugAGGGACUUUUAGGGGCAGCUguguuuuauuaacccagucaUAAUGCCCCUAAAAAUCCUUAUugcucuugcaau
.((((((..((((((((..(((((((((((((((.(((.....))).)))).....))))))))))).))))))))..))))))...

Structure

--a      aa        AC           -----    u   u 
   gcaaga  aaugAGGG  UUUUAGGGGCA     GCUg guu u
   ||||||  ||||||||  |||||||||||     |||| ||| a
   cguucu  uUAUUCCU  AAAAUCCCCGU     ugac caa u
uaa      cg        -A           AAUac    c   u 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-365-5p

• Accession: MIMAT0058331
• Description: Cyprinus carpio ccr-miR-365-5p mature miRNA
• Sequence: 14 - AGGGACUUUUAGGGGCAGCU - 33
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-365-3p

• Accession: MIMAT0026294
• Description: Cyprinus carpio ccr-miR-365-3p mature miRNA
• Sequence: 54 - UAAUGCCCCUAAAAAUCCUUAU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925