Stem-loop ccr-mir-375

Accession

MI0023395

Description

Cyprinus carpio ccr-mir-375 precursor miRNA

Literature search

1 open access papers mention ccr-mir-375
(1 sentences)

Sequence

234133 reads, 1088.0 reads per million, 33 experiments

uguguguuuucuguacuugucucACGUUGAGCCACACGCACAAUAccugcagaugaaaagguUUUGUUCGUUCGGCUCGCGUUAcgcagaugcagacacgc
.(((((...((((((.((((...((((.(((((..(((.((((.((((..........)))).)))).)))..)))))))))...)))).)))))))))))

Structure

u     uuu      c    cuc    U     AC   C    U    gcag 
 gugug   ucugua uugu   ACGU GAGCC  ACG ACAA Accu    a
 |||||   |||||| ||||   |||| |||||  ||| |||| ||||     
 cgcac   agacgu gacg   UGCG CUCGG  UGC UGUU ugga    u
-     ---      a    cAU    -     CU   U    U    aaag 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-375-5p

• Accession: MIMAT0058332
• Description: Cyprinus carpio ccr-miR-375-5p mature miRNA
• Sequence: 24 - ACGUUGAGCCACACGCACAAUA - 45
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-375-3p

• Accession: MIMAT0026295
• Description: Cyprinus carpio ccr-miR-375-3p mature miRNA
• Sequence: 63 - UUUGUUCGUUCGGCUCGCGUUA - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925