Stem-loop ccr-mir-429

Accession

MI0023397

Description

Cyprinus carpio ccr-mir-429 precursor miRNA

Sequence

105055 reads, 509.0 reads per million, 33 experiments

uugaugggcgUCUUACCAGACAUGGUUAGAucuaauaauuugugucUAAUACUGUCUGGUAAUGCCGUccauuacaugcuaa
.(((((((((.(((((((((((..(((((((.(((....))).)))))))..)))))))))).).)))))))))........

Structure

-------u         U -          UG       c   u 
        ugaugggcg C UUACCAGACA  GUUAGAu uaa a
        ||||||||| | ||||||||||  ||||||| |||  
        auuaccUGC G AAUGGUCUGU  UAAUcug guu a
aaucguac         C U          CA       u   u 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-429-5p

• Accession: MIMAT0058334
• Description: Cyprinus carpio ccr-miR-429-5p mature miRNA
• Sequence: 11 - UCUUACCAGACAUGGUUAGA - 30
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-429-3p

• Accession: MIMAT0026297
• Description: Cyprinus carpio ccr-miR-429-3p mature miRNA
• Sequence: 47 - UAAUACUGUCUGGUAAUGCCGU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925