Stem-loop ccr-mir-430

Accession

MI0023398

Description

Cyprinus carpio ccr-mir-430 precursor miRNA

Literature search

2 open access papers mention ccr-mir-430
(15 sentences)

Sequence

2720273 reads, 155060.0 reads per million, 30 experiments

cuaucgguACCCUCACAAUGGCACUGACUUGucuguuguauuuggUAAGUGCUAUUUGUUGGGGUAGuu
.....(.((((((.(((((((((((.(((..............))).))))))).)))).)))))).).

Structure

cuauc g      C    -       G   UGucug 
     g uACCCU ACAA UGGCACU ACU      u
     | |||||| |||| ||||||| |||       
     u AUGGGG UGUU AUCGUGA Ugg      u
----u G      U    U       A   uuuaug 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-430-5p

• Accession: MIMAT0058335
• Description: Cyprinus carpio ccr-miR-430-5p mature miRNA
• Sequence: 9 - ACCCUCACAAUGGCACUGACUUG - 31
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-430-3p

• Accession: MIMAT0026298
• Description: Cyprinus carpio ccr-miR-430-3p mature miRNA
• Sequence: 46 - UAAGUGCUAUUUGUUGGGGUAG - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925