Stem-loop ccr-mir-454a

Accession

MI0023399

Description

Cyprinus carpio ccr-mir-454a precursor miRNA

Sequence

23676 reads, 106.0 reads per million, 33 experiments

gggACCCUAUCAGUAUUGCCUCUGCUguccacuguguucagagUAGUGCAAUAUUGCUAAUAGGguuuc
(((((((((((((((((((..(((((.....(((....)))))))).)))))))))...))))))))))

Structure

          ---         CU     gucca   u 
gggACCCUAU   CAGUAUUGC  CUGCU     cug g
||||||||||   |||||||||  |||||     |||  
cuuugGGAUA   GUUAUAACG  GAUga     gac u
          AUC         -U     -----   u 

Annotation confidence Medium

Genome context

Unknown

Mature ccr-miR-454a-5p

• Accession: MIMAT0058336
• Description: Cyprinus carpio ccr-miR-454a-5p mature miRNA
• Sequence: 4 - ACCCUAUCAGUAUUGCCUCUGCU - 26
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-454a-3p

• Accession: MIMAT0026299
• Description: Cyprinus carpio ccr-miR-454a-3p mature miRNA
• Sequence: 44 - UAGUGCAAUAUUGCUAAUAGG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925