Stem-loop ccr-mir-454b

Accession

MI0023400

Description

Cyprinus carpio ccr-mir-454b precursor miRNA

Sequence

119737 reads, 577.0 reads per million, 33 experiments

ggcgagaCCCUAUCAAUAUUGCCUCUGCUUuuuccacuguuuauggagUAGUGCAAUAUUGCUUAUAGGgucuu
...(((((((((((((((((((..(((((((.............))))))).)))))))))...))))))))))

Structure

ggc          ---         CU       uucca 
   gagaCCCUAU   CAAUAUUGC  CUGCUUu     c
   ||||||||||   |||||||||  |||||||     u
   uucugGGAUA   GUUAUAACG  GAUgagg     g
---          UUC         -U       uauuu 

Annotation confidence Medium

Genome context

Unknown

Mature ccr-miR-454b-5p

• Accession: MIMAT0058337
• Description: Cyprinus carpio ccr-miR-454b-5p mature miRNA
• Sequence: 8 - CCCUAUCAAUAUUGCCUCUGCUU - 30
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-454b-3p

• Accession: MIMAT0026300
• Description: Cyprinus carpio ccr-miR-454b-3p mature miRNA
• Sequence: 49 - UAGUGCAAUAUUGCUUAUAGG - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925