Stem-loop ccr-mir-455

Accession

MI0023401

Description

Cyprinus carpio ccr-mir-455 precursor miRNA

Sequence

72163 reads, 314.0 reads per million, 33 experiments

augccagugugaucccuggugugagggUAUGUGCCCUUGGACUACAUCGuggaagccagcaccaUGCAGUCCAUGGGCAUAUACACUugccucaaggccucgaucu
..........((((...(((.(((((((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).....)))))..)))..)))).

Structure

augccagugu    ccu   -g     -----          U      A   C   gaa 
          gauc   ggu  ugagg     gUAUGUGCCC UGGACU CAU Gug   g
          ||||   |||  |||||     |||||||||| |||||| ||| |||    
          cuag   ccg  acucc     CAUAUACGGG ACCUGA GUa cac   c
---------u    -cu   ga     guUCA          U      C   c   gac 

Annotation confidence Medium

Genome context

Unknown

Mature ccr-miR-455-5p

• Accession: MIMAT0026301
• Description: Cyprinus carpio ccr-miR-455-5p mature miRNA
• Sequence: 28 - UAUGUGCCCUUGGACUACAUCG - 49
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-455-3p

• Accession: MIMAT0058338
• Description: Cyprinus carpio ccr-miR-455-3p mature miRNA
• Sequence: 65 - UGCAGUCCAUGGGCAUAUACACU - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925