Stem-loop ccr-mir-457a

Accession

MI0023402

Description

Cyprinus carpio ccr-mir-457a precursor miRNA

Sequence

72273 reads, 289.0 reads per million, 33 experiments

cugacaguAGCAGCACAUCAAUAUUGGCagcugcccucucccuggguugCCAGUAUGGUUUGUGCUGCUCCCgucag
(((((.(.(((((((((...(((((((((...((((.......)))))))))))))....))))))))).).)))))

Structure

     a u         -UCA         gcu    uc 
cugac g AGCAGCACA    AUAUUGGCa   gccc  u
||||| | |||||||||    |||||||||   ||||  c
gacug C UCGUCGUGU    UAUGACCgu   uggg  c
     C C         UUGG         ---    uc 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-457a-5p

• Accession: MIMAT0026302
• Description: Cyprinus carpio ccr-miR-457a-5p mature miRNA
• Sequence: 9 - AGCAGCACAUCAAUAUUGGC - 28
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-457a-3p

• Accession: MIMAT0058339
• Description: Cyprinus carpio ccr-miR-457a-3p mature miRNA
• Sequence: 50 - CCAGUAUGGUUUGUGCUGCUCCC - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925