Stem-loop ccr-mir-499

Accession

MI0023407

Description

Cyprinus carpio ccr-mir-499 precursor miRNA

Literature search

2 open access papers mention ccr-mir-499
(3 sentences)

Sequence

15893 reads, 100.0 reads per million, 32 experiments

gagggaggcagUUAAGACUUGCAGUGAUGUUUAgagaaaugacacaugAACAUCACUUUAAGUCUGUGCUggcuccug
..(((((.((((..(((((((.(((((((((((.............))))))))))).)))))))..)))).))))).

Structure

ga     g    UA       C           gagaa 
  gggag cagU  AGACUUG AGUGAUGUUUA     a
  ||||| ||||  ||||||| |||||||||||     u
  uccuc gUCG  UCUGAAU UCACUACAAgu     g
-g     g    UG       U           acaca 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-499-5p

• Accession: MIMAT0026309
• Description: Cyprinus carpio ccr-miR-499-5p mature miRNA
• Sequence: 12 - UUAAGACUUGCAGUGAUGUUUA - 33
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-499-3p

• Accession: MIMAT0058342
• Description: Cyprinus carpio ccr-miR-499-3p mature miRNA
• Sequence: 49 - AACAUCACUUUAAGUCUGUGCU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925