Stem-loop ccr-mir-725

Accession

MI0023410

Description

Cyprinus carpio ccr-mir-725 precursor miRNA

Literature search

1 open access papers mention ccr-mir-725
(1 sentences)

Sequence

41841 reads, 551.0 reads per million, 33 experiments

ccugcagugcacacUGCUAGGAAUCGUGGCUGAGAUgaacagcaggauUUCAGUCAUUGUUUCUAGUAGUgggcgcugcag
.(((((((((.(((((((((((((.(((((((((((..........))))))))))).))))))))))))).)))))))))

Structure

c         a             C           gaac 
 cugcagugc cacUGCUAGGAAU GUGGCUGAGAU    a
 ||||||||| ||||||||||||| |||||||||||     
 gacgucgcg gUGAUGAUCUUUG UACUGACUUua    g
-         g             U           ggac 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-725-5p

• Accession: MIMAT0058345
• Description: Cyprinus carpio ccr-miR-725-5p mature miRNA
• Sequence: 15 - UGCUAGGAAUCGUGGCUGAGAU - 36
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-725-3p

• Accession: MIMAT0026312
• Description: Cyprinus carpio ccr-miR-725-3p mature miRNA
• Sequence: 49 - UUCAGUCAUUGUUUCUAGUAGU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925