Stem-loop ccr-mir-726

Accession

MI0023411

Description

Cyprinus carpio ccr-mir-726 precursor miRNA

Literature search

1 open access papers mention ccr-mir-726
(2 sentences)

Sequence

27749 reads, 137.0 reads per million, 33 experiments

ucagucguaugccuGGAAUUCCGCUAGUUCUGAACUauucgugauuggcaaaagUUCACUACUAGCAGAACUCGGauauacaacuga
(((((.(((((.((((..(((.((((((..((((((.((.((.....)))).))))))..)))))).))).)))).))))).)))))

Structure

     c     c    AA   C      UC      a  c  g 
ucagu guaug cuGG  UUC GCUAGU  UGAACU uu gu a
||||| ||||| ||||  ||| ||||||  |||||| || || u
aguca cauau GGCU  AAG CGAUCA  ACUUga aa cg u
     a     a    -C   A      UC      a  -  g 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-726-5p

• Accession: MIMAT0058346
• Description: Cyprinus carpio ccr-miR-726-5p mature miRNA
• Sequence: 15 - GGAAUUCCGCUAGUUCUGAACU - 36
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-726-3p

• Accession: MIMAT0026313
• Description: Cyprinus carpio ccr-miR-726-3p mature miRNA
• Sequence: 55 - UUCACUACUAGCAGAACUCGG - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925