Stem-loop ccr-mir-727

Accession

MI0023412

Description

Cyprinus carpio ccr-mir-727 precursor miRNA

Literature search

1 open access papers mention ccr-mir-727
(2 sentences)

Sequence

accuguaugucauuuUCAGUCUUCAAUUCCUCCCAGCccguaaccauggaaacugugaGUUGAGGCGAGUUGAAGACUUAaagugcuguacag
..(((((((.((((((.((((((((((((......(((..(((((((((...))))).)))).))))))))))))))).)))))).)))))))

Structure

ac       u      C            CUCCCA   cg    -     a 
  cuguaug cauuuU AGUCUUCAAUUC      GCc  uaac caugg  
  ||||||| |||||| ||||||||||||      |||  |||| ||||| a
  gacaugu gugaaA UCAGAAGUUGAG      CGG  GUUG guguc  
--       c      U            ------   -A    a     a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ccr-miR-727-5p

• Accession: MIMAT0026314
• Description: Cyprinus carpio ccr-miR-727-5p mature miRNA
• Sequence: 16 - UCAGUCUUCAAUUCCUCCCAGC - 37
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-727-3p

• Accession: MIMAT0026315
• Description: Cyprinus carpio ccr-miR-727-3p mature miRNA
• Sequence: 59 - GUUGAGGCGAGUUGAAGACUUA - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925