Stem-loop ccr-mir-734

Accession

MI0023415

Description

Cyprinus carpio ccr-mir-734 precursor miRNA

Literature search

1 open access papers mention ccr-mir-734
(1 sentences)

Sequence

1542 reads, 10.0 reads per million, 26 experiments

auccuuugauauugagagcuGAACCGUUCUGCAGCAUGGCUGCCUGuggauccucuggggaaaggUAAAUGCUGCAGAAUCGUACCGUucuugguaucac
......(((((((((((((.(.((.((((((((((((...(((((.....(((...)))...))))).)))))))))))).)).).))))))))))))).

Structure

auccuu             u A  C            GGC     Gugga   u 
      ugauauugagagc G AC GUUCUGCAGCAU   UGCCU     ucc  
      ||||||||||||| | || ||||||||||||   |||||     ||| c
      acuaugguucuUG C UG UAAGACGUCGUA   AUgga     ggg  
-----c             C A  C            --A     --aag   u 

Annotation confidence Medium

Genome context

Unknown

Mature ccr-miR-734-5p

• Accession: MIMAT0058349
• Description: Cyprinus carpio ccr-miR-734-5p mature miRNA
• Sequence: 21 - GAACCGUUCUGCAGCAUGGCUGCCUG - 46
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-734-3p

• Accession: MIMAT0026318
• Description: Cyprinus carpio ccr-miR-734-3p mature miRNA
• Sequence: 66 - UAAAUGCUGCAGAAUCGUACCGU - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925