Stem-loop ccr-mir-92b

Accession

MI0023420

Description

Cyprinus carpio ccr-mir-92b precursor miRNA

Literature search

1 open access papers mention ccr-mir-92b
(1 sentences)

Sequence

682111 reads, 4250.0 reads per million, 33 experiments

guguguuuguagucccgcggucuggcAGGUGUGGGAUGUUGUGCACUGUUguucaaucucccgccaaUAUUGCACUCGUCCCGGCCUCCcugaccacgaggaacacgc
((((((......(((((.((((.((.((((.(((((((..(((((.(((((.............))))).))))).))))))))))).)).)))).)).)))))))))

Structure

      uuguag   -  c    u  c    G       UU     C     uucaa 
gugugu      ucc cg gguc gg AGGU UGGGAUG  GUGCA UGUUg     u
||||||      ||| || |||| || |||| |||||||  ||||| |||||     c
cgcaca      agg gc ccag cC UCCG GCCCUGC  CACGU AUaac     u
      ------   a  a    u  C    -       -U     U     cgccc 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-92b-5p

• Accession: MIMAT0058353
• Description: Cyprinus carpio ccr-miR-92b-5p mature miRNA
• Sequence: 27 - AGGUGUGGGAUGUUGUGCACUGUU - 50
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-92b-3p

• Accession: MIMAT0026324
• Description: Cyprinus carpio ccr-miR-92b-3p mature miRNA
• Sequence: 68 - UAUUGCACUCGUCCCGGCCUCC - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925