Stem-loop ccr-mir-93

Accession

MI0023421

Description

Cyprinus carpio ccr-mir-93 precursor miRNA

Sequence

34640 reads, 245.0 reads per million, 33 experiments

cggguguuAAAAGUGCUGUUUGUGCAGGUAGcuguguuuucucuACUGUAGAAGCAGCACUUCACGacacac
...(((((..(((((((((((.(((((.(((..(......).)))))))).)))))))))))...)))))..

Structure

cgg     -AA           G     G   cu ug 
   guguu   AAGUGCUGUUU UGCAG UAG  g  u
   |||||   ||||||||||| ||||| |||  |   
   cacaG   UUCACGACGAA AUGUC Auc  c  u
-ca     CAC           G     -   -u uu 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-93-5p

• Accession: MIMAT0026325
• Description: Cyprinus carpio ccr-miR-93-5p mature miRNA
• Sequence: 9 - AAAAGUGCUGUUUGUGCAGGUAG - 31
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-93-3p

• Accession: MIMAT0058354
• Description: Cyprinus carpio ccr-miR-93-3p mature miRNA
• Sequence: 45 - ACUGUAGAAGCAGCACUUCACG - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925