Stem-loop ccr-mir-99

Accession

MI0023423

Description

Cyprinus carpio ccr-mir-99 precursor miRNA

Sequence

agccacuugucauuAACCCGUAGAUCCGAUCUUGUgauaaguuuaauggcaccaccguagauccgaucuugugauaaguuuaauggcacaagcucguucuaugggucucugucucugugguagaaaauc
.(((((..(.((...(((((((((..(((.((((((....(((....)))....((((.((.(..(((....)))..).)).)))))))))).))).)))))))))...)).)...)))))........

Structure

-------a     -uu u  uuA         UC   U      auaaguuuaauggcacca    a  u cg   u 
        gccac   g ca   ACCCGUAGA  CGA CUUGUg                  ccgu ga c  auc u
        |||||   | ||   |||||||||  ||| ||||||                  |||| || |  |||  
        uggug   c gu   uggguaucu  gcu gaacac                  ggua uu g  uag g
cuaaaaga     ucu u  cuc         -u   c      ------------------    a  u aa   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ccr-miR-99

• Accession: MIMAT0026327
• Description: Cyprinus carpio ccr-miR-99 mature miRNA
• Sequence: 15 - AACCCGUAGAUCCGAUCUUGU - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925