Accession
MI0023432
Description
Oryza sativa
osa-MIR818f precursor miRNA
Literature search
10 open access papers mention osa-MIR818f
(19 sentences)
(19 sentences)
Sequence
143
reads,
94
reads per million, 2 experiments
gugggggcaucccucacuguuuucugguaaagaaaaauauaauggauuuugacuuuuucuugcacuguuagaccacucgucuuauuaaaaaaauuuggaauuauuauuuauuuuauuugugacuuacuuuauuauccaaaguacuuuaagcacaacuuuucauuuuuuaauauuuggacaauuuuuuuuaaauaagacgagugguuaaacagugcaaagcaaaaaaucaaaaucccuuauauuacgggauggaGGGAGCAUGUAGGAUGGCCAUgccau
((((((.(((((..((.((((((((..........(((((((.(((((((((.((((((((((((((((.(((((((((((((((((((((((.(((....(((((..........(((((.((((...((((......))))...)))))))))............)))))......))).))))))).)))))))))))))))).)))))))).))).))))).))))))))).))))))).........))))))))))..))))).))...))))
((((((.(((((..((.((((((((..........(((((((.(((((((((.((((((((((((((((.(((((((((((((((((((((((.(((....(((((..........(((((.((((...((((......))))...)))))))))............)))))......))).))))))).)))))))))))))))).)))))))).))).))))).))))))))).))))))).........))))))))))..))))).))...))))
Structure
--- g cu c gguaaagaaa u c - - a - u --gaau --uuuauuuuau a cuu au
gugg gg caucc ca uguuuucu aauauaa ggauuuuga uuuuu cuu gcacuguu gaccacucgucuuauu aaaaaaa uug uauua uugug cuua uauu c
|||| || ||||| || |||||||| ||||||| ||||||||| ||||| ||| |||||||| |||||||||||||||| ||||||| ||| ||||| ||||| |||| ||||
uacc CC GUAGG GU ACGAGGGa uuauauu ccuaaaacu aaaaa gaa cgugacaa uuggugagcagaauaa uuuuuuu aac auaau aacac gaau auga c
gUA G AU - -gguagggca c a c a a a u agguuu uuuuuacuuuuc - uuc aa
Annotation confidence
Not enough data
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Genome context
Chr8: 18746588-18746866 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from osa-MIR818f
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature osa-miR818f
| Accession | MIMAT0026335 |
| Description | Oryza sativa osa-miR818f mature miRNA |
| Sequence | 254 - GGGAGCAUGUAGGAUGGCCAU - 274 |
| Evidence |
experimental
Illumina [1] |
References
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