Stem-loop bma-mir-5874

Accession

MI0023483

Description

Brugia malayi bma-mir-5874 precursor miRNA

Sequence

uugacuagcaUCCACUAUUCUUUGUUGACUuaaaaggggucaacaaagaauagugguauuucgggagga
((..((.....((((((((((((((((((((.....))))))))))))))))))))......))..)).

Structure

-  ga  -agcaU                    a 
 uu  cu      CCACUAUUCUUUGUUGACUu a
 ||  ||      |||||||||||||||||||| a
 gg  gg      ggugauaagaaacaacuggg a
a  ag  cuuuau                    g 

Annotation confidence Not enough data

Comments

This microRNA was experimentally validated from deep sequencing libraries in the closely related species Brugia pahangi [1].

Genome context

Bmal_v3_scaffold244: 32078-32146 [+]

Mature bma-miR-5874

• Accession: MIMAT0026373
• Description: Brugia malayi bma-miR-5874 mature miRNA
• Sequence: 11 - UCCACUAUUCUUUGUUGACU - 30
• Evidence: not_experimental

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4