Accession
MI0023500
Description
Brugia malayi
bma-mir-5882b-2 precursor miRNA
Sequence
1561
reads,
754.0
reads per million, 24 experiments
ugucaugaAUAUGCACUGUCCUGAUUACCCAcagcauaucuugucgUGGGCAACCAGAAUAAUGCAUAGUuaugacaguc
((((((((.((((((.(((.(((.((.(((((.(((.....))).))))).)).))).))).)))))).))))))))...
((((((((.((((((.(((.(((.((.(((((.(((.....))).))))).)).))).))).)))))).))))))))...
Structure
--- A C C A A a u ugucauga UAUGCA UGU CUG UU CCCAc gca a |||||||| |||||| ||| ||| || ||||| ||| u acaguauU AUACGU AUA GAC AA GGGUg ugu c cug G A A C C c u
Annotation confidence
High
Do you think this miRNA is real?
Comments
This microRNA was experimentally validated from deep sequencing libraries in the closely related species Brugia pahangi [1].
Genome context
Bmal_v3_scaffold17: 507491-507570 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bma-mir-5882b-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bma-miR-5882b-2-5p
| Accession | MIMAT0057238 |
| Description | Brugia malayi bma-miR-5882b-2-5p mature miRNA |
| Sequence | 9 - AUAUGCACUGUCCUGAUUACCCA - 31 |
| Evidence | not_experimental |
Mature bma-miR-5882b-3p
| Accession | MIMAT0026386 |
| Description | Brugia malayi bma-miR-5882b-3p mature miRNA |
| Sequence | 47 - UGGGCAACCAGAAUAAUGCAUAGU - 70 |
| Evidence | not_experimental |
References
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