Stem-loop sbi-MIR6232a

Accession

MI0023535

Description

Sorghum bicolor sbi-MIR6232a precursor miRNA

Sequence

guagauacauagcuuuuacucuguuccgaauuauaaGUCGCUUUGACUUUUUUGGUACAUcgauuuugcuauguaucuagacauguuguuauaucuagauacauagcaaagUGGAUGUACCAAAAAAGUCAAAGCggcuuauaauuuggaacggagggaguacuauguucguugc
...((.((((((..((..(((((((((((((((((((((((((((((((((((((((((((.(((((((((((((((((((.(((....))).))))))))))))))))))).)))))))))))))))))))))))))))))))))))))))))))..))..)))))))).....

Structure

--gua  u      cu  ua                                           g                   c   u 
     ga acauag  uu  cucuguuccgaauuauaaGUCGCUUUGACUUUUUUGGUACAUc auuuugcuauguaucuaga aug u
     || ||||||  ||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||  
     cu uguauc  ga  gaggcaagguuuaauauucggCGAAACUGAAAAAACCAUGUAG Ugaaacgauacauagaucu uau g
cguug  -      au  gg                                           G                   a   u 

Annotation confidence Not enough data

Genome context

chr2: 206794-206968 [-]

Mature sbi-miR6232a-5p

• Accession: MIMAT0026444
• Description: Sorghum bicolor sbi-miR6232a-5p mature miRNA
• Sequence: 37 - GUCGCUUUGACUUUUUUGGUACAU - 60
• Evidence: not_experimental

Mature sbi-miR6232a-3p

• Accession: MIMAT0026445
• Description: Sorghum bicolor sbi-miR6232a-3p mature miRNA
• Sequence: 112 - UGGAUGUACCAAAAAAGUCAAAGC - 135
• Evidence: not_experimental

References

1. PubMed ID: 22747909
   Computational identification and analysis of novel sugarcane microRNAs
   Thiebaut F, Grativol C, Carnavale-Bottino M, Rojas CA, Tanurdzic M, Farinelli L, Martienssen RA, Hemerly AS, Ferreira PC
   BMC Genomics (2012) 13:290