Stem-loop bfl-mir-34c-2

Accession

MI0023543

Description

Branchiostoma floridae bfl-mir-34c-2 precursor miRNA

Sequence

accucgugcagccaucuggcaguguuguuagcuggccgcuaggagucgcucuuuagGCCCUCUAUCAACGCUGCCCUAcggaagcgcgacac
...((((((..((....((((((((((.(((..((((...(((((...)))))..))))..))).))))))))))....))..))))))...

Structure

acc      ag  aucu          u   cu    gcu     u 
   ucgugc  cc    ggcaguguug uag  ggcc   aggag  
   ||||||  ||    |||||||||| |||  ||||   ||||| c
   agcgcg  gg    CCGUCGCAAC AUC  CCGg   uucuc  
cac      aa  cAUC          U   UC    -au     g 

Annotation confidence Not enough data

Genome context

GG666704.1: 335461-335552 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-34c-2

Mature bfl-miR-34c

• Accession: MIMAT0020451
• Description: Branchiostoma floridae bfl-miR-34c mature miRNA
• Sequence: 57 - GCCCUCUAUCAACGCUGCCCUA - 78
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27