Stem-loop ssc-mir-7134

Accession

MI0023567

Description

Sus scrofa ssc-mir-7134 precursor miRNA

Literature search

2 open access papers mention ssc-mir-7134
(5 sentences)

Sequence

97 reads, 22 reads per million, 11 experiments

AUGUCCGCGGGUUCCCUAUCCcggguugguugaguucgcggAUGCGGAACCUGCGGAUACGG
.((((((((((((((.(((((((((((.....)))))).))))).))))))))))))))...

Structure

--A              C     -      g 
   UGUCCGCGGGUUCC UAUCC cggguu g
   |||||||||||||| ||||| |||||| u
   AUAGGCGUCCAAGG GUAgg gcuuga u
GGC              C     c      g 

Annotation confidence Not enough data

Genome context

chr5: 5388521-5388582 [+]

Mature ssc-miR-7134-5p

• Accession: MIMAT0028143
• Description: Sus scrofa ssc-miR-7134-5p mature miRNA
• Sequence: 1 - AUGUCCGCGGGUUCCCUAUCC - 21
• Evidence: experimental ; Illumina [1-2]

Mature ssc-miR-7134-3p

• Accession: MIMAT0028144
• Description: Sus scrofa ssc-miR-7134-3p mature miRNA
• Sequence: 42 - AUGCGGAACCUGCGGAUACGG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22953717
   Profiling microRNAs in lung tissue from pigs infected with Actinobacillus pleuropneumoniae
   Podolska A, Anthon C, Bak M, Tommerup N, Skovgaard K, Heegaard PM, Gorodkin J, Cirera S, Fredholm M
   BMC Genomics (2012) 13:459


2. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100