Stem-loop ssc-mir-7136

Accession

MI0023569

Description

Sus scrofa ssc-mir-7136 precursor miRNA

Literature search

1 open access papers mention ssc-mir-7136
(3 sentences)

Sequence

4892 reads, 9.0 reads per million, 162 experiments

UCUGGUCCAGACACUGUGGAGCUGaagagaccaacacuUCUCAGUGUUUGAACCAGAAGc
((((((.(((((((((.((((.((..........)))))).))))))))).))))))...

Structure

---      C         U    C  aaga 
   UCUGGU CAGACACUG GGAG UG    g
   |||||| ||||||||| |||| ||     
   AGACCA GUUUGUGAC CUuc ac    a
cGA      A         U    -  aacc 

Annotation confidence High

Genome context

chr7: 8701439-8701498 [+]

Mature ssc-miR-7136-5p

• Accession: MIMAT0028147
• Description: Sus scrofa ssc-miR-7136-5p mature miRNA
• Sequence: 1 - UCUGGUCCAGACACUGUGGAGCUG - 24
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-7136-3p

• Accession: MIMAT0028148
• Description: Sus scrofa ssc-miR-7136-3p mature miRNA
• Sequence: 39 - UCUCAGUGUUUGAACCAGAAG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22953717
   Profiling microRNAs in lung tissue from pigs infected with Actinobacillus pleuropneumoniae
   Podolska A, Anthon C, Bak M, Tommerup N, Skovgaard K, Heegaard PM, Gorodkin J, Cirera S, Fredholm M
   BMC Genomics (2012) 13:459